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Amaxa dermal fibroblasts nucleofector kit
Dermal Fibroblasts Nucleofector Kit, supplied by Amaxa, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/nucleofector+kit/dermal+fibroblasts+kit+nucleofector/pm42314933-260-18-22
Average 86 stars, based on 1 article reviews
dermal fibroblasts nucleofector kit - by Bioz Stars, 2026-11
86/100 stars

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Transfection:

Article Title: Transmural flow modulates cell and fluid transport functions of lymphatic endothelium
Article Snippet: After 4h (static conditions), medium from the bottom side was measured in a Safire 2 plate reader (Tecan) and calibrated to a standard curve to estimate the effective permeability (Peff, μm/sec) as described.22. .. siRNA transfection of DCs and LECs was performed using a Nucleofector kit (Amaxa, Lonza) according to the manufacturer's protocol. .. Control siRNA and siRNA targeting CCR7 on DCs and ICAM-1 on LECs were used (Santa Cruz Biotechnology).

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes.
Article Snippet: Nature Communications | (2022) 13:7430 14 factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using aNucleofector kit (Amaxa) aspermanufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to themanufacturer’s instructions using 50nMof the specific siRNAor non-targeting control for 48 h. Treating MDM cells with TLRs, inflammasome agonists, and SARS-CoV-2 Cells were seeded in appropriate plate with 80% confluency and followed by siRNA transfection. ..

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes
Article Snippet: CD14+ monocytes were cultured at 37 °C and 5% CO 2 in RPMI medium supplemented with 10% fetal calf serum (FCS) and 50 ng/mL macrophage colony-stimulating factor (M-CSF, Peprotech) or granulocyte macrophage colony-stimulating factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using a Nucleofector kit (Amaxa) as per manufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer’s instructions using 50 nM of the specific siRNA or non-targeting control for 48 h. ..

Article Title: Unc119 Protects from Shigella Infection by Inhibiting the Abl Family Kinases
Article Snippet: For Unc119-GFP fusion protein the Unc119 cDNA was cloned into the pLEGFP vector (Clontech, Mountain View, CA). .. The plasmid was transfected into 3T3 cells using lipofectamine 2000 (Invitrogen, Carlsbad, CA) or the Amaxa Nucleofector kit (Amaxa, Inc. MD). ..

Article Title: Treatment of HMGB1-mediated inflammation
Article Snippet: For MD2 knockdown in RAW 264.7 cells, cells were transfected with mouse MD2 or control siRNA (50 nM, on-target plus smart pool, Dharmacon, Lafayett, Colo.) using DharmaFect1 transfection reagent. .. To knockdown MD2 in THP-1 cell, transfection with MD2 specific siRNA was performed by using Amaxa Nucleofector kit. ..

Plasmid Preparation:

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes.
Article Snippet: Nature Communications | (2022) 13:7430 14 factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using aNucleofector kit (Amaxa) aspermanufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to themanufacturer’s instructions using 50nMof the specific siRNAor non-targeting control for 48 h. Treating MDM cells with TLRs, inflammasome agonists, and SARS-CoV-2 Cells were seeded in appropriate plate with 80% confluency and followed by siRNA transfection. ..

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes
Article Snippet: CD14+ monocytes were cultured at 37 °C and 5% CO 2 in RPMI medium supplemented with 10% fetal calf serum (FCS) and 50 ng/mL macrophage colony-stimulating factor (M-CSF, Peprotech) or granulocyte macrophage colony-stimulating factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using a Nucleofector kit (Amaxa) as per manufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer’s instructions using 50 nM of the specific siRNA or non-targeting control for 48 h. ..

Article Title: Unc119 Protects from Shigella Infection by Inhibiting the Abl Family Kinases
Article Snippet: For Unc119-GFP fusion protein the Unc119 cDNA was cloned into the pLEGFP vector (Clontech, Mountain View, CA). .. The plasmid was transfected into 3T3 cells using lipofectamine 2000 (Invitrogen, Carlsbad, CA) or the Amaxa Nucleofector kit (Amaxa, Inc. MD). ..

Cloning:

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes.
Article Snippet: Nature Communications | (2022) 13:7430 14 factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using aNucleofector kit (Amaxa) aspermanufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to themanufacturer’s instructions using 50nMof the specific siRNAor non-targeting control for 48 h. Treating MDM cells with TLRs, inflammasome agonists, and SARS-CoV-2 Cells were seeded in appropriate plate with 80% confluency and followed by siRNA transfection. ..

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes
Article Snippet: CD14+ monocytes were cultured at 37 °C and 5% CO 2 in RPMI medium supplemented with 10% fetal calf serum (FCS) and 50 ng/mL macrophage colony-stimulating factor (M-CSF, Peprotech) or granulocyte macrophage colony-stimulating factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using a Nucleofector kit (Amaxa) as per manufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer’s instructions using 50 nM of the specific siRNA or non-targeting control for 48 h. ..

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..

Small Interfering RNA:

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes.
Article Snippet: Nature Communications | (2022) 13:7430 14 factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using aNucleofector kit (Amaxa) aspermanufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to themanufacturer’s instructions using 50nMof the specific siRNAor non-targeting control for 48 h. Treating MDM cells with TLRs, inflammasome agonists, and SARS-CoV-2 Cells were seeded in appropriate plate with 80% confluency and followed by siRNA transfection. ..

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes
Article Snippet: CD14+ monocytes were cultured at 37 °C and 5% CO 2 in RPMI medium supplemented with 10% fetal calf serum (FCS) and 50 ng/mL macrophage colony-stimulating factor (M-CSF, Peprotech) or granulocyte macrophage colony-stimulating factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using a Nucleofector kit (Amaxa) as per manufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer’s instructions using 50 nM of the specific siRNA or non-targeting control for 48 h. ..

Control:

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes.
Article Snippet: Nature Communications | (2022) 13:7430 14 factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using aNucleofector kit (Amaxa) aspermanufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to themanufacturer’s instructions using 50nMof the specific siRNAor non-targeting control for 48 h. Treating MDM cells with TLRs, inflammasome agonists, and SARS-CoV-2 Cells were seeded in appropriate plate with 80% confluency and followed by siRNA transfection. ..

Article Title: A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes
Article Snippet: CD14+ monocytes were cultured at 37 °C and 5% CO 2 in RPMI medium supplemented with 10% fetal calf serum (FCS) and 50 ng/mL macrophage colony-stimulating factor (M-CSF, Peprotech) or granulocyte macrophage colony-stimulating factor (GM-CSF, Peprotech) for 7 days, replacing media and removing non-adherent cells at day 4. .. MBOAT7 plasmid (pCMV6-AC-MBOAT7-GFP, OriGene) and its empty cloning vector pCMV6-ACGFP, OriGene) were transfected into MDMs using a Nucleofector kit (Amaxa) as per manufacturer’s instructions for 48 h. Small interfering RNA (siRNA) transfection was performed with Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer’s instructions using 50 nM of the specific siRNA or non-targeting control for 48 h. ..

Knockdown:

Article Title: Treatment of HMGB1-mediated inflammation
Article Snippet: For MD2 knockdown in RAW 264.7 cells, cells were transfected with mouse MD2 or control siRNA (50 nM, on-target plus smart pool, Dharmacon, Lafayett, Colo.) using DharmaFect1 transfection reagent. .. To knockdown MD2 in THP-1 cell, transfection with MD2 specific siRNA was performed by using Amaxa Nucleofector kit. ..

Enzyme-linked Immunosorbent Assay:

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..

Luciferase:

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..

Mutagenesis:

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..

Recombinant:

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..

Software:

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..

Sequencing:

Article Title: Neutralizing antibodies evolve to exploit vulnerable sites in the HCV envelope glycoprotein E2 and mediate spontaneous clearance of infection.
Article Snippet: Biological samples Human plasma Cox et al.47 N/A Chemicals, peptides, and recombinant proteins Lipofectamine 2000 transfection reagent Thermo Fisher Scientific Cat#11668019 3 30 5 50-tetamethylbenzidine (TMB) liquid Sigma Aldrich Cat#T4319 Pure Galanthus nivalis lectin (Snowdrop Bulb) EY Labs Cat#L74015 CD81 LEL Fc Chimera protein R&D Systems Cat#9144-CD (Continued on next page) e1 Immunity 57, 40–51.e1–e5, January 9, 2024 .. REAGENT or RESOURCE SOURCE IDENTIFIER Critical commercial assays Ortho HCV version 3.0 ELISA Test System Ortho Clinical Diagnostics Cat#930740 In-Fusion HD Cloning Plus Clontech Cat#638909 HCV Real-time Assay Abbot Cat#01N30-090 QIAamp viral RNA mini column Qiagen Cat# 52904 Luciferase Assay System Promega Cat#E1500 QuikChange Lightning Multi Site-Directed Mutagenesis Kit Agilent Cat#210513 T7 MEGAscript kit Ambion Cat#AM1334 Nucleofector Kit T Amaxa CatVCA-1002 Experimental models: Cell lines Human: Hep3B2.1-7 ATCC Cat# HB-8064, RRID: CVCL_0326 Human: HEK293T/17 ATCC Cat# CRL-11268, RRID: CVCL_1926 Human: CD81-knockout HEK293T Kalemera et al.48 N/A Human: Huh7 Urbanowicz et al.49 N/A Human: Huh7.5.1 Blight et al.50 N/A CHO-CD81 Sabo et al.51 N/A CHO-SR-B1 Sabo et al.51 N/A Recombinant DNA pNL4-3.Luc.R-E- NIH AIDS Reagent Cat# 3418 pAdvantage Promega Cat#E1711 phCMV3-Ig Kappa-HIS Kong et al.52 N/A Software and algorithms Prism v10 GraphPad RRID: SCR_002798 Pixel HIV Sequence Database https://www.hiv.lanl.gov/ The PyMOL Molecular Graphics System v2.0 Schrödinger, LLC RRID:SCR_000305 FlowJo v10 Tree Star RRID: SCR_008520) Other Immulon 2HB strips Thermo Fisher Scientific Cat# 14-245-81 ..



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